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Methylation
Prediction in the Human Genome
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Zhang
Lab, Cold Spring Harbor Laboratory
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Background
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Prediction DNA Methylation prediction using HDMFinder for 22 autosomes. Online prediction is also going to be available on this page. The human genome Build 33 is used in this prediction. Each file contains the methylation prediction information. The file format is as follows: value of 0 in column 1 represents non-CpG island and value of 1 represents CpG island, column 2: is the position of CpG dinucleotide. Column 3: value of 2 represents "+' strand and value of 1 represents "-" strand. column 6 and column 7: present probabilities to remain unmethylated and methylated respectively and column 8: denotes NCGI (for non-CpG island) or CGI (for CpG island). |
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