PFM families for JASPAR cores

Format:  
Index  Matrix1 (Factor name) Matrix2 (Factor name) etc.
aveS  minS

aveS = average similarity in family
minS = minimum similarity in family  


1 MA0013 (Broad-complex_4)  MA0027 (EN-1)  
0.10784 0.10784 

2 MA0068 (Pax-4)  MA0013 (Broad-complex_4)  MA0022 (Dorsal_1)  
0.190774666666667 0.102349 

3 MA0013 (Broad-complex_4)  MA0045 (HMG-IY)  
0.119411 0.119411 

4 MA0013 (Broad-complex_4)  MA0010 (Broad-complex_1)  
0.101237 0.101237 

5 MA0046 (HNF-1)  MA0013 (Broad-complex_4)  
0.0616219 0.0616219 

6 MA0062 (NRF-2)  MA0080 (SPI-1)  
0.74161 0.74161 

7 MA0082 (SQUA)  MA0011 (Broad-complex_2)  
0.0924179 0.0924179 

8 MA0098 (c-ETS)  MA0081 (SPI-B)  MA0026 (E74A)  
0.2601033 0.0700649 

9 MA0026 (E74A)  MA0028 (Elk-1)  
0.325623 0.325623 

10 MA0020 (Dof2)  MA0021 (Dof3)  MA0053 (MNB1A)  MA0064 (PBF)  
0.782158166666667 0.546373 

11 MA0105 (p50)  MA0056 (MZF_1-4)  
0.379234 0.379234 

12 MA0071 (RORalfa-1)  MA0072 (RORalfa-2)  
1 1 

13 MA0110 (ATHB5)  MA0008 (Athb-1)  
0.0707005 0.0707005 

14 MA0096 (bZIP910)  MA0097 (bZIP911)  MA0018 (CREB)  
0.864168333333333 0.793067 

15 MA0087 (Sox-5)  MA0077 (SOX-9)  MA0078 (SOX17)  MA0084 (SRY)  
0.278959666666667 0.149588 

16 MA0104 (n-MYC)  MA0058 (Max)  MA0093 (USF)  MA0059 (Myc-Max)  MA0004 (ARNT)  
0.7775584 0.604265 

17 MA0107 (p65)  MA0023 (Dorsal_2)  MA0101 (c-REL)  
0.541164 0.26985 

18 MA0066 (PPARgamma)  MA0017 (COUP-TF)  MA0074 (RXR-VDR)  
0.413853333333333 0.153154 

19 MA0051 (Irf-2)  MA0050 (Irf-1)  
1 1 

20 MA0054 (MYB.ph3)  MA0100 (c-MYB_1)  MA0034 (GAMYB)  
0.2170956 0.0657798 

21 MA0047 (HNF-3beta)  MA0042 (HFH-3)  
0.10034 0.10034 

22 MA0040 (HFH-1)  MA0030 (FREAC-2)  MA0031 (FREAC-4)  
0.717082333333333 0.562663 

23 MA0103 (deltaEF1)  MA0009 (Brachyury)  
0.293545 0.293545