Matrices:

>RLM1   22      524     MCB 1997, 17:1848-1859
A  10  14  11   0   0   0  42  16  22  23  32   0  42   0  27   4   7  10
T   8  10  30  37   0  42   0  26  20  19  10  42   0   0   1  20  16   7
G  10  16   1   5   0   0   0   0   0   0   0   0   0  42   0   2   3  10
C  10   2   0   0  42   0   0   0   0   0   0   0   0   0  14  15  16  13 

>SMP1   11      405     MCB 1997, 17:1848-1859
A   8   8  11   0   0   8   0   0  30   6  13  14  21   0  30   2   8  27   9   6
T   4  12   0   9  30  11   1  30   0  24  16  16   9  30   0   0   7   1   9   7
G   5   4  19   0   0  11   0   0   0   0   0   0   0   0   0  28   0   0   7   4
C   3   5   0  21   0   0  29   0   0   0   0   0   0   0   0   0  14   0   4   9

>ABF1   7       121     SCPD
A   0   0  11   2   3   7   3   5   5  14   0   1
T  14   0   2   1   6   2   7   3   0   0   0   0
G   0   0   0   0   2   3   1   2   3   0   1  13
C   0  14   1  11   3   2   3   4   6   0  13   0

>CSRE   0       42      SCPD
A   0   0   0   0   0   4   0   1   3   4   1   0   0
T   2   2   0   0   0   0   3   0   0   0   3   1   1
G   1   0   0   4   4   0   0   3   1   0   0   3   3
C   1   2   4   0   0   0   1   0   0   0   0   0   0

>SCB    0       66      SCPD
A   0   6   0   0  10  10  10
T   0   2   0   0   0   0   0
G   0   2   0  10   0   0   0
C  10   0  10   0   0   0   0

>GAL4   5       118     SCPD
A   0   0   0   4   1   1   7   0   5   1   0   2   0   2   0   0   0
T   0   0   0   0   1   1   1   0   5   2   7   2   1   6   0   0   0
G   0  10   9   4   5   3   2   3   0   3   1   1   4   1   1   0  10
C  10   0   1   2   3   5   0   7   0   4   2   5   5   1   9  10   0

>GCN4   3       115     SCPD
A   0   0  22   1   0   5
T  22   1   0   2  21   2
G   0  21   0   2   1   3
C   0   0   0  17   0  12

>GCR1   0       28      SCPD
A   0   2   0   0   0
T   0   4   6   0   0
G   0   0   0   0   0
C   6   0   0   6   6

>MCB    0       67      SCPD
A  10   0   0   0   0   3
T   1   0   0   0   0   9
G   0   0  12   0  12   0
C   1  12   0  12   0   0

>MCM1   5       133     SCPD
A   2   0   2   7  13   5   5  16   0   0
T   0   0   3   5   2  12  10   0   0   0
G   0   0   3   3   1   0   0   1  17  17
C  15  17   9   2   1   0   2   0   0   0

>MATalpha2      0       89      SCPD
A   0   9   0   0   0  10   9   4   0
T   1   0  11   0  11   1   1   7  11
G   0   2   0  11   0   0   0   0   0
C  10   0   0   0   0   0   1   0   0

>MIG1   0       88      SCPD
A   0   0   0   0   6   0   6   1   4   3   4   3
T   0   0   0   0   0   0   2   7   6   7   6   5
G   0   0   0   0   4   5   2   0   0   0   0   0
C  10  10  10  10   0   5   0   2   0   0   0   2

>PHO2   0       35      SCPD
A   0   0   6   6   5   0   0
T   3   6   0   0   1   6   3
G   1   0   0   0   0   0   3
C   2   0   0   0   0   0   0

>PDR1/PDR3      0       136     SCPD
A   0   0   0   1   0   0   0  17
T  18   0   0   0   5   0   0   0
G   0   0   0  17   0  18  17   1
C   0  18  18   0  13   0   1   0

>PHO4   4       87      SCPD
A   3   2   0  12   0   0   0   0   1   3
T   1   1   0   0   0   0  11   5   4   4
G   3   7   0   0   0  12   0   7   5   4
C   5   2  12   0  12   0   1   0   2   1

>REB1   0       97      SCPD
A   0   1  15   0   0   0   0
T  13  11   0   0   0   0   2
G   0   0   0   0   0   0  13
C   2   3   0  15  15  15   0

>ROX1   0       76      SCPD
A   0   0   2   7   0   0   0   0   0   0   1   0
T   4   2   2   0   8   7   0   8   8   2   6   1
G   0   0   0   0   0   1   8   0   0   1   1   2
C   4   6   4   1   0   0   0   0   0   5   0   5

>RAP1   4       145     SCPD
A   8   4  16   0   0   0  13   3  11   0  11   0
T   1   0   0   0   0   1   1   5   3   2   2   7
G   7   0   0   0   0   0   1   5   2   0   0   1
C   0  12   0  16  16  15   1   3   0  14   3   8

>repressor_of_CAR1      2       85      SCPD
A  12   2   0   0   2   0   0   5   8
T   1   0   0   0   1   0   0   1   1
G   0  11   0   0  10   1   2   5   2
C   0   0  13  13   0  12  11   2   2

>SWI5   2       59      SCPD
A   4   0   4   1   1   4   0   0   0   0   0   2
T   0   3   2   3   2   1   5   0   0   7   0   0
G   2   2   0   2   1   0   2   7   0   0   7   5
C   1   2   1   1   3   2   0   0   7   0   0   0

>STE12  0       29      SCPD
A   4   0   0   4   4   4   1   1
T   0   4   0   0   0   0   0   1
G   0   0   4   0   0   0   0   0
C   0   0   0   0   0   0   3   2

>TBP    0       85      SCPD
A   0  14   0  13   9  14   7
T  14   0  14   1   4   0   6
G   0   0   0   0   0   0   1
C   0   0   0   0   1   0   0

>UASPHR 5       110     SCPD
A   3   1   0   4   2   0   1   0   0   2   0   0
T   8   9  11   5   3   9   8   1   1  11   1   4
G   0   2   0   2   1   1   3   0   0   0   0   6
C   2   1   2   2   7   3   1  12  12   0  12   3

>XBP1   23      305     MCB 1997, 17:6491-6501
A   7   7   2   0   0   0  31  15   5  15   5  17
T   5  15  29   0  37   0   0   1   5  18   9   4
G  21   9   5   0   0  37   6  19  27   2  17  13
C   4   6   1  37   0   0   0   2   0   2   6   3

Consensus

ABF1    TCRNNNNNNACG
ACE2    GCTGGT
ADR1    TCTCC
AP-1    TTANTAA
ATF     ACGTCA
BAS2    TAATRA
BAS2    TAANTAA
CPF1    TCACGTG
CuRE    GAGCAAA
CSRE    YCGGAYRRAWGG
SCB     CNCGAAA
GC/FAR  CCCGGG
GC/FAR  GGGCCC
GAL4    CGGNNNNNNNNNNNCCG
GCN4    TGANTN
GCR1    CWTCC
HAP1    CGGNNNTANCGG
HSTF    GAANNTCC
HSTF    GAANNNTCC
HSTF    TTCNNGAA
HSTF    TTCNNNGAA
LEU3    CGGRACCGG
MCB     WCGCGW
MCM1    CCNNNWWRGG
MATalpha2       CRTGTWWWW
MIG1    CCCCRNNWWWWW
MSE     CRCAAAW
NBF     ATGYGRAWW
PHO4    CACGTK
PDR3    TCCGYGGA
PPR1    TTCGGNNNNNNCCGAA
PUT3    CGGNNNNNNNNNNCCG
REB1    YYACCCG
ROX1    YYNATTGTTY
RAP1    RMACCCA
RME1    GAACCTCAA
repressor_of_CAR1       AGCCGCSA
SWI5    KGCTGR
STE12   ATGAAA
TBP     TATAWAW
T4C     TTTTCTYCG
TEA1    CGGNNNNNNNNNNCCG
UASPHR  CTTCCT
URSPHR  GTSAAAGTAWG
UASRAD  WTTTCCCGS
UASINO  ATGTGAAWW
SFF     GTMAACAA
ECB     GGAAAAD
STRE    AGGGG
ORC     WTTTATRTTTW