Gene Regulatory Network of TF family RAR in human
Note:
Ellipses are TFs. Boxes are genes.
Hexagons are the clustered genes. The number of the genes is shown inside.
Red lines indicate the protein-DNA binding is known.
Only official gene symbols are used in the network.
Listing of the gene clusters (TFs are underlined):
5→RARA:CSF2, PRKCG, RBP1, THRA, VIPR1.
5→RARB: CRABP1, IGF1, NR2E1, NR1H2, NR1H4.
RARA→55: ELF4, ESR1, ETS1, HOXA1, HOXA4, HOXA7, HOXB4, HOXD4, AR, POU5F1, PPARG, STAT3, STAT5B, TCF1, TCF2, CDK7, NCOA2, GADD45G, CYP19A1, GADD45A, ALB, HGF, HES1, HSD17B1, APOD, IL8, MMP1, MUC1, MUC4, MUC5AC, MYCN, GADD45B, MYH6, NEDD9, ASB2, ABCB1, PLAU, PML, UGT1A6, UGT1A3, SCD, BGLAP, STRA6, SLC10A2, SMPD1, TGFB1, TGFB2, TNFAIP2, TNFRSF1B, VEGF, TBL1XR1, NRIP1, TMSB10, CD38, NCOR2.
RARB→9: MYC, CDKN1B, HDAC1, ACADM, KRT1, PRRG1, PTGS2, RBP4, TERT.
RARA + RARB→5: ADH1C, APOA1, KRT19, PCK1, PLAT.
RARA + RARB + RARC→33: JUN, NFKB1, POU1F1, BCL2, NCOA1, CETP, PNRC1, CRABP2, CSH1, ALDH2, FLG, ALPP, GSTP1, IBSP, ICAM1, IL2, INS, MIF, SERPINF1, PTHLH, RARRES3, RPE65, SFTPB, SLC5A5, SMARCA1, SMARCA2, KLF5, TG, TGM1, TITF1, TPO, NCOA3, FBP2.
Gene Regulatory Network of TF family RAR in mouse
Note:
Ellipses are TFs. Boxes are genes.
Hexagons are the clustered genes. The number of the genes is shown inside.
Red lines indicate the protein-DNA binding is known.
Only official gene symbols are used in the network.
Listing of the gene clusters (TFs are underlined):
Rara→11: Hoxa4, Hoxa5, Etv4, Aldh1a1, Chat, Ngfr, Nsd1, Psmc5, Pthlh, Slc18a3, Nr2c1.
Rara + Rarb + Rarg→16: Fli1, Pou5f1, Catnb, Col1a2, Cryab, Mdk, Pcp2, Scd1, Tgfbr3, Tgm1, Tgm2, Titf1, Trh, Ucp1, Rqcd1, Grip1.
Gene Regulatory Network of TF family RAR in rat
Note:
Ellipses are TFs. Boxes are genes.
Hexagons are the clustered genes. The number of the genes is shown inside.
Red lines indicate the protein-DNA binding is known.
Only official gene symbols are used in the network.
Listing of the gene clusters (TFs are underlined):
Rara→9: Cebpa, Orm1, Ghrhr, Gdnf, Ucp3, c-fos, Ucp2, Tgm2, Mthfd1.
Rarb→5: Cdkn1a, Tnf, Cdkn2a, Pck1, Cdkn1b.
Rara + Rarb + Rarg→11: Eno2, Rbp2, Ucp1, Vdr, Crabp1, Cyp7a1, Oxt, Cyp4f5, Crabp2, Agtr1, Catnb.