Gene Regulatory Network of TF family USF in human
Note:
Ellipses are TFs. Boxes are genes.
Hexagons are the clustered genes. The number of the genes is shown inside.
Red lines indicate the protein-DNA binding is known.
Only official gene symbols are used in the network.
Listing of the gene clusters (TFs are underlined):
USF1→37: ESR1, ETV4, HOXB7, TP53, CHI3L1, ADH1A, ADH1B, ADH1C, CR2, ADRA2B, CYP1A1, CYP3A7, STRA13, FASN, GCK, GTF2I, HGF, APEX1, ID4, IFNG, IRF3, ISG20, KCNN3, MC1R, MHC2TA, MYH6, OGN, POMC, ATP10A, CCND1, S100A6, ST3GAL1, SNAPC1, C4A, TYR, XDH, TRIM25.
USF2→6: AR, BRCA1, ATP5A1, THRB, TOP3A, CBS.
USF1 + USF2→82: CEBPA, GLI1, HOXB4, SP1, SP3, BRCA2, CEACAM5, CEL, CGA, CTSB, CTSD, CYP1A2, CYP19A1, DUSP1, ABCA1, ALB, FBP1, FCER1A, FGA, FMR1, FSHR, NR5A1, G22P1, GH1, GYPB, HBB, ACACA, HMOX1, APC, APOA2, IAPP, APOC3, APOE, IGF2R, IGH@, APP, IL3, INS, IPF1, LAMA3, LIPC, LIPE, MAOB, CITED1, MYH9, MYOC, CEACAM6, NCBP1, ATP2A2, SERPINE1, GHRL, PF4, SERPINE2, PIGR, PKLR, ACP5, AVP, B2M, PTGS2, PTPN6, G6PC2, CEACAM1, SLC1A3, SLC19A1, TCN2, TERT, TFF2, TGFB1, TGFB2, THBS1, TYMS, CXCR4, CAD, CALCA, CCK, CCNB1, CCND2, DPP9, CD2, B4GALT5, TNFRSF8, CDC2.
Gene Regulatory Network of TF family USF in mouse
Note:
Ellipses are TFs. Boxes are genes.
Hexagons are the clustered genes. The number of the genes is shown inside.
Red lines indicate the protein-DNA binding is known.
Only official gene symbols are used in the network.
Listing of the gene clusters (TFs are underlined):
Usf1→18: Cebpa, Hoxb4, Hoxb7, Msx1, Igh, Atp10a, C2ta, Cpt1a, Cryaa, Hbb, Klf4, Npr1, Surf2, Sdc1, Tbx2, Trim25, Tyms, Ces2.
Usf1 + Usf2→36: Pax5, Igk, Igl-2, Acp5, Chrna7, Apeg1, Atp2a2, Bdnf, Bmp4, Cfh, Cited1, Col1a1, Fasn, Fshr, Hgf, Hoxb7, Mt1, Mxi1, Myoc, Nos2, Oprd1, Ipf1, Prkaca, Pklr, Pola2, Ptgs2, Ren1, Spp1, Thrsp, Tnfrsf8, Top3a, Ceacam1, Nr5a1, Gabbr1, Slc2a5, Cad]
.
Gene Regulatory Network of TF family USF in rat
Note:
Ellipses are TFs. Boxes are genes.
Hexagons are the clustered genes. The number of the genes is shown inside.
Red lines indicate the protein-DNA binding is known.
Only official gene symbols are used in the network.
Listing of the gene clusters (TFs are underlined):
Usf1→9: Aldoc, Fgg, Ins2, Chrna7, Thrsp, Mrc1_predicted, Myh6, RGD1308160_predicted, Itgax.
Usf1 + Usf2→24: Tp53, Adh1, Bdnf, Calca, Hmox1, Myl2, Serpine1, Pck1, Pklr, Tac1, Gcgr, Spp1, Apeg1, Fshr, Igfbp1, Cpt1b, Rps14, Pdx1, Atp2a2, Fasn, App, Hsf2, Bhlhb2, Tgfb2.