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NUMBER
- DM_RI_00_NO_G_U_N_M0374
DEFINITION
- RBP-1, intron II
REFERENCE
- Kim, Y.J., Zuo, P., Manley, J.L., and Baker, B.S., The Drosophila RNA-binding protein RBP1 is localized to transcriptionally active sites of chromosomes and shows a functional similarity to human splicing factor ASF/SF2. Genes Dev, 1992. 6: p. 2569-79.
EXPRESSION
- nd
REGULATORY FEATURES
- stop codon
TEMPORAL REGULATION
- expressed at all developmental stages
TECHNIQUE
- northern and cloning
ACCESSION
- L04929
SOURCE
- genomic DNA
5' SCORE
- NA
3' SCORE
- NA
ACCEPTOR SITE
- na
EXON SEQUENCE
- 2 gtaattccac gacaaaaaaa ctgtacttct catgttactt ggctcaatgt gtctcccaaa tggaacaatg gatcacttga ctccaaaaat tgggtacttt cttcaggttt ctaagcatat gatggcggtc ttgcctgtaa ccgtcaaaat taatcaatcc ttatcaaaac gtataaaatt tgttatcgaa atttcattgg aatcgtcgca aaaaacatta attgcgaata gcaaacatgt acattttccc gcctttttct gcacgtgata gaacagcctt cgaaatgtca gttttatgag tacttcttcg caggctgttt tattcatgtc caactgacat cacatcgcta ttcataacat ttctaattaa aaattgactt ggtactttat ttagaccaaa cttacaaact gtatacatat attatctacg atccaatcat ttagtggttg ttaaattcga gttatcgaca ctttttcagg ataactcttc ggctagaact acttccactg ctacttcttc cttctacaac atcaacaatc tacaacagca accatcttca cagccacagc cagcaacctt caacttgcaa ctctaaatta accatgttca gcgtcacagc ctcacagaag ttttgattag caacccaaat gatttcatcc tagaagaagc aatgcagtcg cccaaagagt tcttttttaa agttatcctg cgtatccttc aaataattgc ttacaattat ttctttaatt tagttgccta tgatatgagg gttcgtccgc cttctcaagt acttgactct gatgtcgaga aaactggcct tgaacgcgtt taacgctgat gatcacagct actatagatt tgttcgacca ttttcttatt gcatatgtat ccgacaaagt agaaagcttt aaactctaat tataggatat cagttggtaa tagatagtaa atgtaattgc agcagctaaa tgtaatagca gcattagcaa taatactctt atcttaattg gttcacagct taattcatag aaacaaaaca gtttgcacag ctttcatttt tgttccccct ggtaattagt ttaagtaact atttagcagt atttaacact cctattttgc agctctttgt aaggcgcgta tgtacataca cttcttacca ttctaagctg atttaaataa ttttattaag cttttaagta atcatttctt ctttaccaat gcgtttattt cag
DONOR SITE
- na
5' EXON
- 0 ccgcttgctc acctcccgca atactcacga taccgcaccg cccgacaaaa ATGCCGCGAT ATAGGGAGTG GGACTTGGCC TGCAAGGTGT ACGTGGGAAA CCTGGGCTCC TCGGCGTCCA AGCACGAGAT AGAAGGCGCA TTTGCCAAAT ATGGACCCCT GCGAAACGTG TGGGTGGCCC GCAATCCACC AGGTTTCGCC TTTGTCGAAT TTGAGGATCG CCGTGACGCG GAAGACGCAA CGGCTGCCCT GGACGGAACA CGCTGCTGCG GCACTAGGAT TCGCGTAGAG ATGTCTTCGG GTCGCTCGCG CGATCGCCGG CGCGGAGAAG GCGGCAGTAG TGGTCGCTCT GGTTCCGGAC GCTACAG
3' EXON
- 2 GTCACGTTCG CCACGTCGCT CCCGATCGCC CCGCAGCCGC AGCTTCTCGC GCGATCGTCG AAGTCGCTCG GATTCTCGGG ATCGTCATTA ATGTTTCCAA AAGGATATCG TTTAAGCAGT GTCGCATCAA AGAACAAGCC GCCAAGGCCG TATTTTCTGT AGGAATTCCT ATGTCGATTG CGATCCAAGT AAATTTACTT CAGATGACAA TATAAATCTT TCGATGCATT CTTGAA
DISEASE
- disease
COMMENTS
- complete gene strukture known ;; biological implications: Heinrichs, V. and Baker, B.S., The Drosophila SR protein RBP1 contributes to the regulation of doublesex alternative splicing by recognizing RBP1 RNA target sequences. Embo J, 1995. 14: p. 3987-4000.
REVISION
- created on Apr 18, 1998