Data Modifying Form for the Entry: 0873-c
Name of the Submitter:
Species:
abbreviation
Splicing Mechanism:
CA
cassette
ME
mutually exclusive exons
A3
alternative 3' splice site
A5
alternative 5' splice site
AE
alternative 3' exon with polyA
RI
retained intron
UU
other or unknown
Tissue:
abbreviation
Temporal (developmental) Regulation:
DE: yes / NO: no / UU: unknown
Sequence Information:
C: cDNA / G: genomic DNA / U: unknown
Promoter Use:
F: follows / D: different / U: unknown
Disease Involvement:
Y: yes / N: no / U: unknown
4 Digits Internal Number:
Name of the Gene:
para locus, voltage sensitive sodium channel, exon c
Give the Full Reference, Including Title:
@89376565 Loughney, K., Kreber, R., and Ganetzky, B. (1989). Molecular analysis of the para locus, a sodium channel gene in Drosophila. Cell, 58(6), 1143-54.
Expression Pattern (e.g., expressed in muscle):
predominantly expressed in neurons
Regulatory Features (e.g., encodes stop codon, phosphorylation):
exon c provides an additional glycosylation site; exon located in transmembrane domain
Temporal Regulation:
nd
Technique Used to Determine the Expression Pattern:
screening, cloning
Accession number of the exon:
Genomic or cDNA?:
Give 12 nucleotides of the 3' splice site:
Give the Sequence of the Alternatively-spliced Exon:
Reading Frame:
unknown
1st
2nd
3rd
ctgcgtgttt tcaagctggc caaatcgtgg ccgacgctga atttgctcat atcgattatg ggccgcactg tcggagccct cggcaatctg accttcgtcc tgtgcattat tatcttcata ttcgcggtca tgggcatgca gctgtttggc aagaactaca cagatcac
Give 6 nucleotides of the 5' splice site:
Give the Sequence (or accession number) of the 5' Common Exon:
Reading Frame:
unknown
1st
2nd
3rd
ctatttgttg gcggcgagaa gggcaacgat gacaacaaca aagagaagat gtccattcgg agcgtcgagg tggag
Give the Sequence (or accession number) of the 3' Common Exon:
Reading Frame:
unknown
1st
2nd
3rd
ggggccatca tagtgcccgt gtactatggc aatctaggct cccgacactc atcgtatacc tcgcatcagt cccga
Disease or Abnormal Processing Described?:
nd
Comments:
exon c mutual exclusive to exon d; the two mutual exclusive exons only differ in two amino acids
Revision (will be updated automatically!):
This entry is modified on 970316 ;; item 13 differs from the seq in U26716
To submit the data, press this button:
To clear the form, press this button:
Go to
Alternative Splicing Database Home Page
nakai@imcb.osaka-u.ac.jp