Data Modifying Form for the Entry: M0061-ex12A3
Name of the Submitter:
Species:
abbreviation
Splicing Mechanism:
CA
cassette
ME
mutually exclusive exons
A3
alternative 3' splice site
A5
alternative 5' splice site
AE
alternative 3' exon with polyA
RI
retained intron
UU
other or unknown
Tissue:
abbreviation
Temporal (developmental) Regulation:
DE: yes / NO: no / UU: unknown
Sequence Information:
C: cDNA / G: genomic DNA / U: unknown
Promoter Use:
F: follows / D: different / U: unknown
Disease Involvement:
Y: yes / N: no / U: unknown
4 Digits Internal Number:
Name of the Gene:
L-histidine decarboxylase, alternative part of exon 12
Give the Full Reference, Including Title:
@94117478 Yatsunami, K., Ohtsu, H., Tsuchikawa, M., Higuchi, T., Ishibashi, K., Shida, A., Shima, Y., Nakagawa, S., Yamauchi, K., Yamamoto, M. and et, a.l. (1994) Structure of the L-histidine decarboxylase gene. J Biol Chem 269(2): 1554-9.
Expression Pattern (e.g., expressed in muscle):
nd
Regulatory Features (e.g., encodes stop codon, phosphorylation):
stop codon
Temporal Regulation:
nd
Technique Used to Determine the Expression Pattern:
cloning
Accession number of the exon:
Genomic or cDNA?:
Give 12 nucleotides of the 3' splice site:
Give the Sequence of the Alternatively-spliced Exon:
Reading Frame:
unknown
1st
2nd
3rd
GGGTCCTAAT TGTCTCACAG AAAATGTGTT AAAGGAAATA GCTAAAGCTG GCCGTCTCTT CCTCATCCCG GCCACTATCC AGGACAAGTT AATCATCCGT TTCACTGTGA CATCCCAGTT TACCACTAGG GATGACATCC TGAGAGACTG GAATCTCATT CGAGATGCTG CCACTCTCAT CCTGAGTCAG CACTGTACTT CCCAACCC
Give 6 nucleotides of the 5' splice site:
Give the Sequence (or accession number) of the 5' Common Exon:
Reading Frame:
unknown
1st
2nd
3rd
GGTACTGAAA TGGCTAAATA TTTTGAATCT CTGGTCAGAA ACGACCCTTC CTTTGAAATT CCTGCCAAGA GGCACCTTGG CCTGGTGGTT TTTCGTCTAA AG
Give the Sequence (or accession number) of the 3' Common Exon:
Reading Frame:
unknown
1st
2nd
3rd
AGCCCTCGGG TTGGGAACCT CATCTCCCAA ATCAGGGGTG CCAGAGCCTG GGCCTGTGGA ACGTCCCTTC AGTCTGTCAG TGGGGCAGGA GATGATCCAG TCCAGGCCAG GAAGATCATC AAGCAGCCTC AGCGTGTGGG AGCCGGTCCC ATGAAAAGGG AAAATGGCCT CCATCTTGAA ACCCTGCTGG ACCCAGTTGA TGACTGCTTT TCAGAAGAGG CCCCAGATGC CACCAAGCAC AAGCTGTCCT CCTTCCTGTT CAGTTACTTG TCTGTGCAGA CTAAGAAGAA GACGGTGCGC TCCCTCAGTT GCAACAGTGT GCCAGTG
Disease or Abnormal Processing Described?:
na
Comments:
complete gene structure known
Revision (will be updated automatically!):
created on Apr 18, 1998
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Alternative Splicing Database Home Page
nakai@imcb.osaka-u.ac.jp