Data Modifying Form for the Entry: m0293-169
Name of the Submitter:
Species:
abbreviation
Splicing Mechanism:
CA
cassette
ME
mutually exclusive exons
A3
alternative 3' splice site
A5
alternative 5' splice site
AE
alternative 3' exon with polyA
RI
retained intron
UU
other or unknown
Tissue:
abbreviation
Temporal (developmental) Regulation:
DE: yes / NO: no / UU: unknown
Sequence Information:
C: cDNA / G: genomic DNA / U: unknown
Promoter Use:
F: follows / D: different / U: unknown
Disease Involvement:
Y: yes / N: no / U: unknown
4 Digits Internal Number:
Name of the Gene:
endothelin-2 (human), alternative exon
Give the Full Reference, Including Title:
@93312336 O'Reilly, G., Charnock-Jones, D.S., Morrison, J.J., Cameron, I.T., Davenport, A.P., and Smith, S.K., Alternatively spliced mRNAs for human endothelin-2 and their tissue distribution. Biochem Biophys Res Commun, 1993. 193: p. 834-40.
Expression Pattern (e.g., expressed in muscle):
nd
Regulatory Features (e.g., encodes stop codon, phosphorylation):
frameshift
Temporal Regulation:
nd
Technique Used to Determine the Expression Pattern:
PCR and cloning
Accession number of the exon:
Genomic or cDNA?:
Give 12 nucleotides of the 3' splice site:
Give the Sequence of the Alternatively-spliced Exon:
Reading Frame:
unknown
1st
2nd
3rd
attcaggtgc tgaggctcag agagcttaag cgcctccccc aagatcacac aggcaagtgg ggaccagatg ggggcagctt agctatagcc tgtgtttact tctgtgagat ggagtggccg cccttctcca gagctagctg agagccttct ttgagaacag ggggaccagc ctgtctgaga ggggagagag actaggaggt tcccaattcc caacttcaga cagacagc
Give 6 nucleotides of the 5' splice site:
Give the Sequence (or accession number) of the 5' Common Exon:
Reading Frame:
unknown
1st
2nd
3rd
cttctgccac ttggacatca tctgggtgaa cactcctga
Give the Sequence (or accession number) of the 3' Common Exon:
Reading Frame:
unknown
1st
2nd
3rd
ggacatttcc acagtcaaga gcctctttgc caagcgacaa caggaggcc
Disease or Abnormal Processing Described?:
disease
Comments:
reading frame was not given in paper or genbank accession
Revision (will be updated automatically!):
created on 971128
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Go to
Alternative Splicing Database Home Page
nakai@imcb.osaka-u.ac.jp