Data Modifying Form for the Entry: m0797-a
Name of the Submitter:
Species:
abbreviation
Splicing Mechanism:
CA
cassette
ME
mutually exclusive exons
A3
alternative 3' splice site
A5
alternative 5' splice site
AE
alternative 3' exon with polyA
RI
retained intron
UU
other or unknown
Tissue:
abbreviation
Temporal (developmental) Regulation:
DE: yes / NO: no / UU: unknown
Sequence Information:
C: cDNA / G: genomic DNA / U: unknown
Promoter Use:
F: follows / D: different / U: unknown
Disease Involvement:
Y: yes / N: no / U: unknown
4 Digits Internal Number:
Name of the Gene:
Ank3 (epithelial ankyrin), form A
Give the Full Reference, Including Title:
@95340633 Peters, L.L., John, K.M., Lu, F.M., Eicher, E.M., Higgins, A., Yialamas, M., Turtzo, L.C., Otsuka, A.J., and Lux, S.E. (1995) Ank3 (epithelial ankyrin), a widely distributed new member of the ankyrin gene family and the major ankyrin in kidney, is expressed in alternatively spliced forms, including forms that lack the repeat domain. J Cell Biol 130(2): 313-30.
Expression Pattern (e.g., expressed in muscle):
gene is predominatly expresed in kidney but also in all other tissues examined
Regulatory Features (e.g., encodes stop codon, phosphorylation):
nd
Temporal Regulation:
nd
Technique Used to Determine the Expression Pattern:
PCR
Accession number of the exon:
Genomic or cDNA?:
Give 12 nucleotides of the 3' splice site:
Give the Sequence of the Alternatively-spliced Exon:
Reading Frame:
unknown
1st
2nd
3rd
taaggaaagc cagcgccccc gaaaagctca gtgatgggga atatatctca gacggtgaag aag
Give 6 nucleotides of the 5' splice site:
Give the Sequence (or accession number) of the 5' Common Exon:
Reading Frame:
unknown
1st
2nd
3rd
gtcgtgacgg aggaaattat gaccaccact accatcacgg agaagcacaa aatgaatgtc ccagaaacga tgaatgaagt cctcgatatg tcagacgatg aag
Give the Sequence (or accession number) of the 3' Common Exon:
Reading Frame:
unknown
1st
2nd
3rd
gtgaagatgc catcacaggg gacactgaca agtatctcgg gccacaggac cttaaggagc taggtgatga ctccctgcca gcagaaggtt acgtag
Disease or Abnormal Processing Described?:
na
Comments:
exon located between the repeat and spectin binding domain
Revision (will be updated automatically!):
created on 970618
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Alternative Splicing Database Home Page
nakai@imcb.osaka-u.ac.jp