Untitled Document
Cold Spring Harbor Laboratory
Mammalian Promoter Database
(Version 2.0, May 2005)

  - Current version
  - Old version

 About CSHLmpd
  - Method
  - Statistics
  - References
  - Release Notes
  - Credits

  - DME
  - TCAT

 Related links
  - ZhangLab
  - CSHL


  • Eukaryotic Promoter Database (EPD) (v79)

  •     developed by Cavin PR, Junier T, Bucher P.

  • Database of Transcriptional Start Site (DBTSS) (version 3)

  •     developed by Sugano's group in University of Tokyo and his collaborators.

  • Genbank

  •     developed by National Center for Biotechnology Information (NCBI) in NIH.

  • Stanford report assay promoter

  •     done by Myers Lab at Stanford.

  • UCSD chIP-chip promoter

  •     contributed by Bin Ren's group in Ludwig Institute for Cancer Research, University of California, San Diego.

  • Twinscan prediction

  •     developed by Michael Brent's group in Laboratory for Computational Genomics at Washington University, St. Louis.

  • GenomeScan prediction

  •     developed by Chris Burge group in the Biology Department at MIT.

  • Ensembl genome browser (v26)

  •     developed by EMBL-EBI (http://www.ebi.ac.uk/) and the Sanger Institute (http://www.sanger.ac.uk/).

  • UCSC genome browser

  •     developed by UCSC Genome Browser project team.

  • Gbrowse/GMOD project (1.53)

  •     developed by GMOD group (http://www.gmod.org).

    We acknowledge all mammalian genome sequencing projects consortium for supplying whole genome sequences. Our work also could not be done without the support from Cold Spring Harbor Laboratory IT department.