formattable examples

Example files

This File may be used to try the examples below

example.faa

Example 1

formattable -o example.tab example.faa

Produces a gk-table for the sequences in example.faa, tabulating all 6-mers in the format of 3-mer-gap-3-mer with a maximum gap size of 5.

Example 2

formattable -w 8 -g 6 -o example.tab \
example.faa

Produces a gk-table for the sequences in example.faa, tabulating all 8-mers in the format of 4-mer-gap-4-mer with a maximum gap size of 6.