TCat: known motifs for Mouse SkeletalMuscle

Sites for motif Ske.Mm.T00005 in promoters of SkeletalMuscle-specific transcripts in Mouse.Legend

Sites

Transcript

Gene

Votes

Sequence

Location

Strand

FD

NM_153153

Svil

3

CCTCCCCACC

CGTCCCCGAC

-377

-55

n

p

0.998

0.958

NM_146189

Mybpc2

3

CCTCCCCCCC

-851

n

0.912

NM_033268

Actn2

3

CCTCCCCTCC

GCTCCCCAGC

-819

-31

n

p

0.991

0.987

NM_028001

2300003C06Rik

3

GCTCCCCAGC

-474

p

0.987

NM_021883

Tmod1

3

GCTCCCAGGC

GGTCCCCGGC

CCTCCCCGCC

-132

-124

-80

p

n

n

0.971

0.969

1.000

NM_021484

Ttid

3

CCTCCCCTCC

-740

n

0.991

NM_016754

Mylpf

3

CCTCCCAACC

75

p

0.980

NM_013456

Actn3

3

CCTCCCCGGC

73

n

0.996

NM_011620

Tnnt3

3

CCTCCCAGAC

-965

n

0.961

NM_009394

Tnnc2

3

CCTCCCCTCC

-119

n

0.991

NM_173021

Phka1

2

CCTCCCAAAC

TCTCCCCGCC

-787

-162

n

n

0.959

0.904

NM_172992

Phtf2

2

CCTCCCACCC

-107

p

0.894

NM_153786

Vgll2

2

GGTCCCCGCC

-71

p

0.973

NM_153542

Lrrc20

2

CCTCCCCGCC

-112

p

1.000

NM_153064

Ndufs2

2

GGTCCCCTAC

CCTCCCTGCC

-329

-98

n

p

0.943

0.901

NM_145999

Rhot2

2

CCTCCCGGCC

26

n

0.901

NM_145533

Smox

2

GCTCCCCGCC

CCACCCCGCC

CGTCCCCGGC

CCTCCCCTCC

CCTCTCCGCC

-121

-80

-70

33

41

p

n

n

n

n

0.993

0.896

0.975

0.991

0.895

NM_145521

D830019K17Rik

2

CGTCCCCAAC

-70

p

0.956

NM_145463

9430059P22Rik

2

GCTCCCCTGC

CCTCCCCGGC

CCTCCCCTGC

-586

-364

-287

n

n

n

0.980

0.996

0.987

NM_145420

Ube2d1

2

CCTCCCCGCC

-56

n

1.000

NM_144534

Tmem38a

2

CCTCCCCGGC

-10

n

0.996

NM_139117

Csda

2

TCTCCCCGCC

CCTGCCCGCC

CGTCCCCAGC

-49

-30

49

p

p

p

0.904

0.895

0.973

NM_138664

ORF28

2

CCTCCCAAGC

-999

n

0.976

NM_138628

2310001N14Rik

2

CTTCCCCGCC

-68

p

0.900

NM_133667

Pdk2

2

GCTCCCAAGC

CCTCCCTACC

-992

-55

p

n

0.969

0.899

NM_133201

Mfn2

2

GCTCCCCTCC

CCTCCCCGCC

TCTCCCCTCC

CCTCCCCTCC

-367

-362

-344

-36

p

p

p

p

0.985

1.000

0.896

0.991

NM_054085

Alpk3

2

CCTCCCTGGC

-112

p

0.896

NM_033270

E2f6

2

GGTCCCCTCC

52

p

0.964

NM_031173

Cacnb1

2

CCTCCCCACC

-285

p

0.998

NM_029569

Asb5

2

GGTCCCAGCC

76

n

0.955

NM_029095

1110011D13Rik

2

CCTCCCTGCC

CCTCCCCCCC

GGTCCCCACC

-163

-67

-13

p

p

n

0.901

0.912

0.971

NM_027799

5530600A18Rik

2

CCGCCCCGCC

CCGCCCCGCC

GGTCCCAAGC

CCGCCCCGCC

-788

-783

-589

70

p

p

p

n

0.896

0.896

0.948

0.896

NM_027126

Hfe2

2

CGTCCCCAGC

-605

p

0.973

NM_027109

Dnase1l1

2

CCACCCCGCC

-121

n

0.896

NM_026880

Pink1

2

GGTCCCCGGC

-50

n

0.969

NM_026738

1110007C09Rik

2

CCTCCCCGAC

-915

p

0.979

NM_026509

2310039E09Rik

2

CCTCCCACCC

-186

p

0.894

NM_026017

Dullard

2

CCTCCCCAGC

-209

p

0.994

NM_025985

Ube2g1

2

CCTCCCCTTC

CCTCGCCGCC

CCTCCCCGCG

-7

52

87

p

n

p

0.900

0.895

0.895

NM_025535

Sara2

2

GGTCCCAGGC

-67

n

0.951

NM_025508

Gmpr

2

CCTCCCCAAC

-760

n

0.977

NM_025434

Mrps28

2

GCTCCCATAC

-524

n

0.946

NM_023049

Asb2

2

CCTCCCCAGC

-299

n

0.994

NM_022314

Tpm3

2

CCTCCCCAGC

CCTCCCATCC

-786

-118

n

n

0.994

0.973

NM_021515

Ak1

2

GCTCCCAAGC

CGTCCCCACC

-862

-177

p

n

0.969

0.977

NM_021514

Pfkm

2

CCTCCCAGAC

GCTCCCCTCC

-625

-25

p

p

0.961

0.985

NM_021430

2900002H16Rik

2

CCTCCCCGGC

CCTCCCAGGC

GCTCCCAGCC

-367

-136

30

n

p

n

0.996

0.978

0.976

NM_019874

Dnajb5

2

CCTGCCCGCC

35

n

0.895

NM_019765

Rsn

2

GCTCCCCAGC

-818

p

0.987

NM_016872

Vamp5

2

CCTCCCCGCA

GCTCCCAGCC

-724

-604

p

n

0.895

0.976

NM_016798

Pdlim3

2

TCTCCCCGCC

CTTCCCCGCC

-141

-44

n

n

0.904

0.900

NM_016712

Tmod4

2

ACTCCCCACC

-72

p

0.902

NM_015825

Sh3bgr

2

CCTCCCCTCC

GCTCCCAGCC

-117

-108

n

n

0.991

0.976

NM_013648

Rtn2

2

CCTCCCCAAC

CCTCCCAAGC

CCTCCCCCGC

-670

-362

25

n

p

p

0.977

0.976

0.908

NM_012029

Sitpec

2

CCTCCCCAAC

-808

n

0.977

NM_011724

2

CCTCCCAGCC

CCTCCCTAGC

GGTCCCCTGC

-674

-139

59

p

p

n

0.982

0.894

0.960

NM_011694

Vdac1

2

GCTCCCCTCC

GCTCCCAGCC

CCTCCTCGCC

-349

-14

-6

p

p

p

0.985

0.976

0.895

NM_011079

Phkg1

2

TCTCCCCTCC

-432

n

0.896

NM_010596

Kcna7

2

GCTCCCCAGC

67

p

0.987

NM_010434

Hipk3

2

TCTCCCCTCC

-834

n

0.896

NM_009427

Tob1

2

CCTCCCCACC

CCTCCCCGCC

CGTCCCCGCC

CCGCCCCGCC

CCTCCCCCGC

-883

-829

-679

-482

-185

n

n

p

n

n

0.998

1.000

0.979

0.896

0.908

NM_009415

Tpi1

2

CCTCCCCTCC

CCTCCCTGCC

-776

-272

p

p

0.991

0.901

NM_009405

Tnni2

2

ACTCCCCACC

-186

p

0.902

NM_009323

Tbx15

2

GCTCCCCACC

CCTCCCCCGC

-180

-72

n

n

0.991

0.908

NM_009204

Slc2a4

2

GGTCCCCTCC

CCTCCCCCGC

TCTCCCCAGC

CCGCCCCGCC

-695

-499

-158

-64

p

p

p

n

0.964

0.908

0.898

0.896

NM_008830

Abcb4

2

CCTCGCCGCC

-17

n

0.895

NM_008733

Nrap

2

CCTCCCCGCC

-399

n

1.000

NM_008664

Myom2

2

CGTCCCCACC

-910

p

0.977

NM_008657

Myf6

2

GCTCCCCTCC

-372

n

0.985

NM_008155

Gpi1

2

CCGCCCCGCC

-79

n

0.896

NM_007688

Cfl2

2

CCGCCCCGCC

-32

p

0.896

NM_007582

Cacng1

2

CCTCCCAAGC

-518

n

0.976

NM_007438

Aldoa

2

GCTCCCAGAC

CGTCCCCAGC

-364

-301

p

n

0.954

0.973

NM_020033

Ankrd2

1

GCTCCCCTGC

CCACCCCGCC

-425

-51

p

n

0.980

0.896