Sites for motif Ske.Mm.T00017 in promoters of SkeletalMuscle-specific transcripts in Mouse.Legend
Sites
Transcript Gene Votes Sequence Location Strand FD
NM_153153Svil3
CGCGCCCCGC
CGCGCCCCGC
GGGAGCGCGC
CGCGGCGGGC
-76
-63
-34
82
n
n
p
n
0.957
0.957
0.965
0.990
NM_146189Mybpc23
CGGGCCTGGG
GGCAGCCGGC
GGGGGCTGGG
CGGGGCGGCC
-716
-660
-455
-87
p
p
n
p
0.952
0.956
0.970
0.970
NM_033268Actn23
CGCAGCCCGC
GGCGGCGGGC
GGCGGCTGGG
-168
-164
-27
p
n
n
0.953
0.988
0.965
NM_021883Tmod13
GGGAGCGGGG
CGGGGCTGGG
CGCGCCCCGC
CGGGGCGCGG
GGGGGCGGGC
CGCGGCCGCC
GGCGGCCGCG
-920
-170
-57
-56
-31
-10
-10
p
p
n
p
n
p
n
0.974
0.972
0.957
0.995
0.993
0.957
0.960
NM_013456Actn33
GGGGCCTGGG
GGGGGCCGGG
GGGGCCGGGG
-980
69
70
n
p
p
0.950
0.990
0.978
NM_173021Phka12
GGGGGCGGGG
GGGGGCGGGG
CGGGGCGGCC
-165
-68
9
p
n
n
0.998
0.998
0.970
NM_172992Phtf22
GGGGGCGCGG
GGGACCGGGC
CGCAGCCCGC
CGGAGCGCGG
GGCAGCGCGC
GGCGGCGCGC
GGCGGCGGGG
-204
-92
-75
-9
31
35
45
n
n
n
p
p
n
p
0.994
0.949
0.953
0.971
0.959
0.983
0.993
NM_153786Vgll22
GGGGGCGGGG
-68
n
0.998
NM_153542Lrrc202
CGCGCCGCGC
88
p
0.965
NM_153064Ndufs22
GGGGGCGCGC
-38
p
0.989
NM_145999Rhot22
CGGGCCGGGC
19
p
0.975
NM_145533Smox2
CGGGGCTGGC
GGGGGCGGGG
CGGGCCCGGG
CGGAGCGGGG
GGGGCCCCGC
CGGGGCCCCC
GGGGGCCCCG
GGCGGCTGGC
CGGAGCCCGG
-229
-118
-102
-55
-51
-50
-50
-29
75
p
n
p
p
n
p
n
p
n
0.967
0.998
0.972
0.976
0.961
0.957
0.960
0.960
0.963
NM_145521D830019K17Rik2
CGGGCCTGGG
CGGAGCCGGG
-180
-61
n
p
0.952
0.968
NM_1454639430059P22Rik2
CGCAGCCGGG
GGCAGCCCGC
GGCGCCGGGC
CGCGGCCGCC
GGCGGCCGCG
GGCGGCGGCC
CGGAGCCCGC
CGCAGCCGGC
-544
-355
-343
-321
-321
-318
-302
-206
p
p
n
p
n
n
n
p
0.962
0.951
0.968
0.957
0.960
0.963
0.959
0.958
NM_145420Ube2d12
CGCGCCCCGC
CGGGGCGCGG
CGCGGCGGGG
GGCGGCGCCG
GGCGGCGGCG
CGCGCCCGGG
GGCAGCCCGG
-65
-64
-59
-2
1
26
61
n
p
p
n
n
p
p
0.957
0.995
0.995
0.963
0.968
0.966
0.956
NM_144534Tmem38a2
GGCAGCGGGG
CGCGCCCCGC
CGGGGCGCGG
CGGGGCCGGG
GGGGCCGGGG
-35
-31
-30
-14
-13
p
n
p
p
p
0.969
0.957
0.995
0.992
0.978
NM_139117Csda2
CGGGGCGGGG
GGCGGCGGGC
CGGGGCCGGG
GGCGGCGGGC
CGCGGCGGCG
CGCGGCGCGG
CGCGCCGCGC
-46
-23
13
71
74
79
80
n
n
p
n
n
n
p
1.000
0.988
0.992
0.988
0.970
0.990
0.965
NM_1386282310001N14Rik2
GGGGGCGGGG
-65
n
0.998
NM_133667Pdk22
CGGGGCTGGC
CGGGGCGCCG
-292
-109
p
p
0.967
0.970
NM_133201Mfn22
GGGAGCGGGC
CGCGGCGGCC
CGCGCCGGGG
-371
19
59
n
n
p
0.969
0.965
0.975
NM_080856Asb142
GGCAGCCCGG
-742
n
0.956
NM_054085Alpk32
CGGGCCGGGG
CGGGGCTGGG
GGGGCCTGGG
49
54
61
p
p
p
0.980
0.972
0.950
NM_053252LOC1146012
CGGGGCGGGG
-63
n
1.000
NM_033270E2f62
GGCGGCGGGG
GGCGGCGGCG
GGCAGCGGGC
-128
-125
-75
n
n
p
0.993
0.968
0.964
NM_031173Cacnb12
CGGGGCCGCG
CGCGGCCCCG
GGGGCCGCGG
CGCGCCGCGG
CGCGGCGCGG
GGCGGCGGCG
GGCGGCGGCG
GGCGGCGGCG
-71
-71
-70
-66
-65
-5
-2
1
p
n
p
n
p
p
p
p
0.967
0.957
0.974
0.970
0.990
0.968
0.968
0.968
NM_0290951110011D13Rik2
GGCAGCGCGC
86
p
0.959
NM_028283Uaca2
GGGGCCCCGG
CGGGGCCCGC
CGGGCCCCGC
CGGAGCGCGC
CGCAGCCCGC
-17
7
8
16
54
n
n
p
n
p
0.965
0.983
0.962
0.967
0.953
NM_0277995530600A18Rik2
GGGGGCGGGC
CGGGGCGGGG
CGGGGCGGGG
CGGGGCGGCG
GGCGGCGGGG
CGGGGCCGCG
CGCGGCCCCG
GGGGCCGCGG
CGGAGCCGGC
CGGGGCCGCG
CGCGGCCCCG
CGCGCCCGGC
CGGGGCGGGC
GGGAGCCGGC
CGCGGCCGGC
GGCGGCGGCG
GGCGGCGGCG
CGGGGCGGGG
CGGGGCGGCC
GGCGGCCCGG
CGGGCCCCGG
CGGGGCCCGG
GGGGCCCGGG
-796
-790
-785
-205
-202
-197
-197
-196
-135
-89
-89
-32
-8
28
32
44
47
67
72
75
81
82
83
n
n
n
p
p
p
n
p
p
p
n
n
p
p
n
p
p
p
p
p
n
p
p
0.993
1.000
1.000
0.975
0.993
0.967
0.957
0.974
0.963
0.967
0.957
0.962
0.995
0.961
0.982
0.968
0.968
1.000
0.970
0.980
0.967
0.987
0.970
NM_027126Hfe22
GGGGGCGGGG
CGGGCCGGGG
GGGGCCCCGG
CGGGGCCCCG
CGGGGCCCCG
GGGGCCCCGC
CGGGGCCGGG
GGGGCCGGGC
-329
-323
-316
-315
-315
-314
-298
-297
n
n
n
p
n
p
p
p
0.998
0.980
0.965
0.962
0.962
0.961
0.992
0.973
NM_026880Pink12
GGGGGCGGCG
-18
n
0.973
NM_0267381110007C09Rik2
GGCGGCTCGG
CGCGCCGGGC
CGGGGCGGCG
GGCGGCGCCG
-134
29
58
61
n
p
p
p
0.960
0.970
0.975
0.963
NM_0266730610008C08Rik2
CGCGCCGGGG
-357
n
0.975
NM_0265092310039E09Rik2
GGGGCCTGGG
-880
p
0.950
NM_026270Akt1s12
GGGGGCGGGG
-559
p
0.998
NM_0261202410127L17Rik2
GGGAGCCGGG
CGCGGCGGCG
CGGAGCGCGC
28
64
88
p
p
n
0.966
0.970
0.967
NM_026017Dullard2
GGGGGCCCCC
GGGGGCCCCC
GGCGGCGCGC
GGCGGCGGCG
GGCGGCGGCG
GGGGGCGGCG
GGGGGCGGGC
-188
-188
-158
-155
-152
-149
-139
p
n
n
n
n
n
n
0.956
0.956
0.983
0.968
0.968
0.973
0.993
NM_025985Ube2g12
CGCGGCGCGC
CGCGCCGCGG
CGCGGCGGCC
CGGGCCGCCG
GGCGGCCCGG
-30
-29
-24
-22
-21
n
p
p
n
p
0.985
0.970
0.965
0.950
0.980
NM_025535Sara22
GGCAGCCCGG
GGGGCCTGGG
-263
-70
p
p
0.956
0.950
NM_025508Gmpr2
CGGGGCGGGG
GGGGGCGGGG
CGGAGCTGGG
-69
-18
22
p
p
p
1.000
0.998
0.948
NM_025434Mrps282
GGGGGCGGGC
-37
n
0.993
NM_024176Drap12
CGGGGCTCGG
CGGGCCCGGC
CGGAGCCGGG
GGCGGCGGCG
GGCGGCGGCG
GGCGGCGGCG
GGCGGCGGCG
GGCGGCGGCG
CGCGGCGGGG
CGGGGCGCGG
CGCGCCCCGC
GGCGGCGGCC
GGCGGCGGCG
GGCGGCGGCG
GGCGGCGGCG
CGGGGCGGGG
CGGAGCCGGC
-722
-356
-352
-322
-319
-316
-313
-310
-298
-293
-292
-273
-270
-267
-264
-204
-129
p
p
n
n
n
n
n
n
n
n
p
n
n
n
n
p
p
0.968
0.967
0.968
0.968
0.968
0.968
0.968
0.968
0.995
0.995
0.957
0.963
0.968
0.968
0.968
1.000
0.963
NM_023049Asb22
GGGGGCGGGG
-281
p
0.998
NM_021515Ak12
GGGAGCCGGG
-111
n
0.966
NM_0214302900002H16Rik2
CGGAGCGCGG
CGGAGCCGGG
CGGAGCCGGG
CGCGGCCCGG
CGGGCCGCGG
GGGACCGCGG
GGCGGCGGCG
GGGAGCCCGC
GGCGGCGGGC
-417
-371
-351
-172
-171
-167
-59
34
75
p
p
p
n
p
n
n
p
n
0.971
0.968
0.968
0.982
0.975
0.950
0.968
0.957
0.988
NM_019874Dnajb52
GGGGGCGGGC
GGGGGCGGGC
GGGAGCCCGC
CGGAGCCGGG
-837
2
6
76
p
p
n
p
0.993
0.993
0.957
0.968
NM_018748Golga42
GGCGCCCGGG
CGCGCCCCGG
GGCGGCGGCG
GGCGGCGGCG
GGCGGCGGCG
CGCGGCGGCG
GGCGGCGGCG
-21
-16
12
15
18
84
87
p
n
n
n
n
p
p
0.965
0.962
0.968
0.968
0.968
0.970
0.968
NM_016872Vamp52
GGGGGCGGGG
GGCAGCGGGC
-969
-811
p
p
0.998
0.964
NM_016798Pdlim32
GGGGGCGGGG
-47
p
0.998
NM_013935Ptpla2
GGGAGCGCGC
CGCGGCGCGC
GGGAGCGCGC
GGCGGCGCCG
GGCGCCGGGG
CGGGGCGGGG
CGCGCCCCGC
CGGGGCGCGC
CGCGGCCGGG
GGGGGCGCGC
GGCGGCGCCG
GGCGGCGGCC
GGCGGCCGCG
CGCGGCCGCC
-186
-182
-114
-100
-97
-92
-88
-87
-80
-73
-37
8
11
11
p
n
n
p
p
p
n
p
p
p
p
p
p
n
0.965
0.985
0.965
0.963
0.973
1.000
0.957
0.991
0.986
0.989
0.963
0.963
0.960
0.957
NM_013648Rtn22
GGGGCCTGGG
GGCGGCGGCG
GGCGGCGGCG
-18
49
70
n
p
p
0.950
0.968
0.968
NM_0117242
GGGGGCGGGG
-34
n
0.998
NM_011694Vdac12
CGGAGCCGGC
CGCGGCTCGC
GGCGGCGCGG
CGCGGCGGCG
CGGAGCGGCG
-581
-165
-61
-58
-43
p
p
n
n
n
0.963
0.957
0.988
0.970
0.951
NM_011099Pkm22
GGCGCCCGGG
GGCGGCGGCG
GGCGGCGGCG
CGGGGCGCCC
GGCGCCCCGC
CGGGGCGCCG
GGCGGCGCCC
CGCAGCCCGG
CGGGCCGCCG
GGCGGCCCGC
-325
-298
-295
-122
-105
-104
-102
-89
-47
-46
p
p
p
n
n
p
n
p
n
p
0.965
0.968
0.968
0.966
0.955
0.970
0.958
0.958
0.950
0.975
NM_010866Myod12
GGGGGCGGGG
-78
n
0.998
NM_010434Hipk32
GGCGGCCCGC
CGCAGCCCGC
GGCGCCGCGG
CGGGGCCGCC
GGCGGCCCCG
GGCGGCGGCC
CGGGGCGGCC
GGCAGCGCGG
GGCGCCGCGC
CGCGGCGCCC
CGGGGCGCCG
-192
-180
-121
-100
-100
-45
0
38
42
43
45
n
n
p
p
n
p
p
p
n
p
n
0.975
0.953
0.968
0.962
0.955
0.963
0.970
0.964
0.963
0.960
0.970
NM_009427Tob12
CGCGGCCGGG
GGGGGCGGGG
CGCGCCCCGC
CGGGGCGCGC
CGCGGCGCGC
CGCGCCGCGG
CGCGCCGGGC
GGCGGCCCGG
CGGGCCGCCG
GGGAGCGGCG
GGGGGCGCGG
GGCAGCGGGC
CGCGGCTGGG
CGCGGCTCGG
GGCGGCGGCC
CGGGGCGGCG
GGGGGCGCCG
GGCGGCCCGC
CGCGGCGCGG
CGCGGCCCGG
-901
-832
-802
-801
-795
-794
-765
-728
-727
-581
-564
-554
-532
-526
-518
-480
-295
-166
-160
-138
p
p
n
p
n
p
n
n
p
n
n
n
n
p
p
p
p
p
n
n
0.986
0.998
0.957
0.991
0.985
0.970
0.970
0.980
0.950
0.949
0.994
0.964
0.967
0.962
0.963
0.975
0.969
0.975
0.990
0.982
NM_009405Tnni22
GGCGGCTGGG
GGGGCCCGGC
-134
-55
p
p
0.965
0.965
NM_009323Tbx152
GGGGGCTGGC
GGCGCCGCGG
CGCGGCGCCG
GGCGGCGCCG
GGCGGCGGCG
-481
-12
-11
-9
-6
p
n
p
n
n
0.966
0.968
0.965
0.963
0.968
NM_009228Snta12
GGGGCCCCGG
CGGGGCCCCG
CGGGGCCCCG
GGGGCCCCGC
GGGGGCGGGG
GGGGGCGGGG
GGCGGCGGGG
CGGAGCGGGC
GGGACCGGGC
-75
-74
-74
-73
-69
-54
18
48
68
n
p
n
p
n
n
n
p
p
0.965
0.962
0.962
0.961
0.998
0.998
0.993
0.971
0.949
NM_009204Slc2a42
GGCAGCGCGC
GGCGGCGCGC
-644
-640
p
n
0.959
0.983
NM_009107Rxrg2
GGGGGCTGGG
GGGGGCGGGG
GGCGGCGGCG
GGCGGCGGCG
GGCGGCGGCG
-940
-241
82
85
88
n
n
p
p
p
0.970
0.998
0.968
0.968
0.968
NM_008830Abcb42
GGCGGCCGCG
CGCGGCCGCC
CGGGCCCGGG
-42
-42
52
p
n
p
0.960
0.957
0.972
NM_008155Gpi12
CGGGGCGGGG
CGCAGCGGGC
GGCGGCGCGC
-77
-47
-17
p
n
n
1.000
0.966
0.983
NM_007688Cfl22
GGGGGCGGGC
CGGGGCGCGC
CGCGCCCCGC
CGGGGCGGGG
GGCGGCGGGC
GGCGGCGGGC
-62
-39
-38
-34
-5
49
p
n
p
n
n
n
0.993
0.991
0.957
1.000
0.988
0.988
NM_007582Cacng12
CGGAGCTGGG
37
n
0.948
Questions or Comments? Contact Andrew Smith. Last updated: Wed Aug 30 12:10:50 2006